Browse of TCMCG007C38153 protein

CDS

Accession Number	TCMCG007C38153
gbkey	CDS
Protein Id	XP_009151320.1
Location	complement(17777391..17780321)
Gene	LOC103874637
GeneID	103874637
Organism	Brassica rapa

Protein

Length	976aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA249065
db_source	XM_009153072.3
Definition	pentatricopeptide repeat-containing protein At5g61990, mitochondrial [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category	S
Description	Pentatricopeptide repeat-containing protein At5g61990
KEGG_TC	-
KEGG_Module	M00016        [VIEW IN KEGG] M00017        [VIEW IN KEGG] M00018        [VIEW IN KEGG] M00033        [VIEW IN KEGG] M00525        [VIEW IN KEGG] M00526        [VIEW IN KEGG] M00527        [VIEW IN KEGG]
KEGG_Reaction	R00480        [VIEW IN KEGG]
KEGG_rclass	RC00002        [VIEW IN KEGG] RC00043        [VIEW IN KEGG]
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko00002        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko03029        [VIEW IN KEGG]
KEGG_ko	ko:K00928        [VIEW IN KEGG] ko:K17964        [VIEW IN KEGG]
EC	2.7.2.4        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko00260        [VIEW IN KEGG] ko00261        [VIEW IN KEGG] ko00270        [VIEW IN KEGG] ko00300        [VIEW IN KEGG] ko01100        [VIEW IN KEGG] ko01110        [VIEW IN KEGG] ko01120        [VIEW IN KEGG] ko01130        [VIEW IN KEGG] ko01210        [VIEW IN KEGG] ko01230        [VIEW IN KEGG] map00260        [VIEW IN KEGG] map00261        [VIEW IN KEGG] map00270        [VIEW IN KEGG] map00300        [VIEW IN KEGG] map01100        [VIEW IN KEGG] map01110        [VIEW IN KEGG] map01120        [VIEW IN KEGG] map01130        [VIEW IN KEGG] map01210        [VIEW IN KEGG] map01230        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0004518        [VIEW IN EMBL-EBI] GO:0004519        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009451        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016787        [VIEW IN EMBL-EBI] GO:0016788        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043412        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0090305        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGATAAGCTCAACGTTGTTTAGGAGCAGATGTTTACTTCTCCGATCGTTTTCCGTTCAAATCGGGAAACCTCCCGACGCATCAGCCGAAATAGCGGGAATCCTCAATACGGCGAACTGGCGCGACGCCTTGGTGTCTTCGAATCTCGCGGCGGAGATAAACCCAGACGTCGTTCTCTCCGTTCTGCGATCAAAACGCGTCGATGATCCCGCTAAGCTTCTGAGCTTCTTCAATTGGGTGGATTCTCAGAAGGTTACGGAGCAGAAACTTGATTCGTTTTCGTTTCTCGCTTTAGGTTTGTGTAGCTTCGGTAGTTTAGGGCAAGCTCGTAGTGTTGTAATCAGGATGATTGAGAGGAAGTGGCCTGTATCTGAGGTTTTGAGCTCGGTTGCGAGATGTTCGCGAGAGTTGAGTGATGGCGGCGGAGTTGTGTATGGGATCTTGATTGATGTGTATATTGATAAAGGGTTTTTAGACGAAGCTGCTTTTGTGATTACAAACACTAAGGATTTGGTTCTTGATTCGTCAAGATGTAACGTTTTGTTGGATGCGTTTTTGAAGAGGAATCGTCTTGATTTGTTTTGGGATGTGTATAATGAGATGGCTGAGAGAAGTCTAGTGTTTGATGTGCACAGTTATGAAAAGTTGATTGTTGCACATTGCAGAGGTGGGAATGTTCAGCTGGCAAAAGATGTTCTTCTTAAAGCCGAAGAAAAGTTTGGGATGGTGAGTGTGGCTGTGTATGGCTTGGTCAACGAAGCGTTGTGTAAAAAGGGAGATGTGGATGAAGCTCTTGAGCTAAAGAAGAGGATGATTATCAAAGGATTGGTGCCATCGAAGCAGTCATTTAATATACTTGTAGGTGGGATGTGTAAGCGGAAGAGACTAGATGATGCTAAAGCGTTGGTGGTAGAGATGAATAGTTTTGGTGTGTTTCCTGATAATATCACTTGCAGTATACTGATCGAGGGTTTACTGAAGGGGAGGGATGCAGACGCTGCAAATGGACTAGTCCATGAGATGGTTTCTCTTGGGATGAACATTGATCCTAAGATGTATGATTCTTATATTTGTGTGATGTCAAAAGAAGGGGCGATGGAGAAGGCAAAAGCTCTCTTTGATGGGATGATCGCGTCCGGAGTGACACCAGGTGCTCGAGCTTTTGCTAGTTTGGTCGAGGGATACGTTCAAGGAAAGAATGCACTTAAGGGTTATGAGTTACTTGTTGAAATGAAAAGGAGGAACATTGTCATATCTCCATATATTTATGGTATAACGGTTAAGTGCATGTGTTCTTCTGGGGATATCGATGGAGCTTATAAGATTGTGAAGGAGATGGGTGCAAGCGGCTGTAGACCCAATGTGGTTATATTCACAACATTGATCAAAACCTTTCTCCAAAAAGGTAGGTTTGGAGATGCGGTGAGGGTGCTGAAAGAAATGAAGGAACAAGGGATTGCACCAGACACATTCTGCTACAATTCCCTTATAATTGGTCTTTCAAAGGCCAAAAGGATGGACGAAGCAAGGTCTTATCTGGTTGAAATGGTTGAAAACGGATTAAAGCCTGATGCTTTCACCTACGGGGCTTTTATCAGTGGATATATAGAAGCAGGGGAATTTGCATCCGCAGAGAAATATTTTAAAGAGATGGTGGAATGTGGTGTGGTTCCAAATAAGGTCTTGTGCACGGGTCTGATCAATGAGTATTGCAAAAAGGGAAAAGTAATTGAGGCGTGTTCGGCATTCAGATCCATGGTTGAACAAGGGATTCCAGGGGATGCTAAGACATACACTGTTCTTATGAATGGTCTCGTTAAAAATGGTAAAGTAGACGGTGCGGAGGAGATATTCCAGGAAATGCGTGGAAAGGGTATAGCACCTGATGTATTCTCTTACGGTACACTCATTGATGGGTTTTCTAAGTTGGGAAATATGGAAACGGCTTCTCGTATTTTTGATGAGATGGTTCAAGAAGGTGTGACTCCTAATGTCATCATATACAACATGTTGCTTGGTGGCTTTTGCAGGTCTGGTGACATCGAAAGAGCTAAAGAAATTTTCAACGGAATGTCAGGAAAAGGTTTCCCCCCTAATGCAGTGACGTACTGTACAATCATAGATGGTTGTTGCAAATATGGGGATCTAGAAGAGGCTTTTCGGTTATTTGACGAGATGAAATTAAAGGGATTAGCTCCTGACAGTTTTGTGTACACGACACTTGTGGATGGGTGTTGCAGATGGAACGATTTGGAAAGAGCTATAGCCATCTTCGAGACAGAAGAGATGAGTTGTGGTTCTTCTACCGCCCCCTTCAATGCTTTGATCAACTGGGTTTTGAAGTTCGGAAAAACAGAATTAAAAACAAAACTGATAAATATGGTGATGGACGGGTCGCTTGATAAGCATGGCAAGCCCAATGACGTAACTTACAACATCATGATAGATTATTTATGCAGGGAAGGAAATTTGGAAGCTGGAAAGGAGCTATTGCAGGACATGCACAAGGCAAACCTGATGCCTAGTGTTGTAACTTACACATCTCTTCTAAACGGGTGTGATAAAATGGGTAGGAGATTGGAAATGTTTGCTATATTCGACGAGGCCATTGCCTCAGGAATTGAACCAGACAGCATAATGTACAGTGTCATCATTACTGCTTTCCTGAAAGAAGGGATGAAGACAAAAGCACTAGCGTTCGTGGATGAAATGTTTGCCAAGAACGCTGCTGTGGACGGGTGTAAGCTAAGTATATCGACATGCCGGGCTCTACTCTCTGGTTTTGCTAAAGTGGGAGGAATGGAGGCAGCTGAGAAGGTTATGGAGAACATGATACGTCTCAAATATATTTCCGATTCTTCGAGTCTCGTTGAGTTGATTAATGAGGGTATTTCTTCAAACGAGAGGATGGAAGCAGATGCAGCTCCATAG

Protein:   MISSTLFRSRCLLLRSFSVQIGKPPDASAEIAGILNTANWRDALVSSNLAAEINPDVVLSVLRSKRVDDPAKLLSFFNWVDSQKVTEQKLDSFSFLALGLCSFGSLGQARSVVIRMIERKWPVSEVLSSVARCSRELSDGGGVVYGILIDVYIDKGFLDEAAFVITNTKDLVLDSSRCNVLLDAFLKRNRLDLFWDVYNEMAERSLVFDVHSYEKLIVAHCRGGNVQLAKDVLLKAEEKFGMVSVAVYGLVNEALCKKGDVDEALELKKRMIIKGLVPSKQSFNILVGGMCKRKRLDDAKALVVEMNSFGVFPDNITCSILIEGLLKGRDADAANGLVHEMVSLGMNIDPKMYDSYICVMSKEGAMEKAKALFDGMIASGVTPGARAFASLVEGYVQGKNALKGYELLVEMKRRNIVISPYIYGITVKCMCSSGDIDGAYKIVKEMGASGCRPNVVIFTTLIKTFLQKGRFGDAVRVLKEMKEQGIAPDTFCYNSLIIGLSKAKRMDEARSYLVEMVENGLKPDAFTYGAFISGYIEAGEFASAEKYFKEMVECGVVPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGIPGDAKTYTVLMNGLVKNGKVDGAEEIFQEMRGKGIAPDVFSYGTLIDGFSKLGNMETASRIFDEMVQEGVTPNVIIYNMLLGGFCRSGDIERAKEIFNGMSGKGFPPNAVTYCTIIDGCCKYGDLEEAFRLFDEMKLKGLAPDSFVYTTLVDGCCRWNDLERAIAIFETEEMSCGSSTAPFNALINWVLKFGKTELKTKLINMVMDGSLDKHGKPNDVTYNIMIDYLCREGNLEAGKELLQDMHKANLMPSVVTYTSLLNGCDKMGRRLEMFAIFDEAIASGIEPDSIMYSVIITAFLKEGMKTKALAFVDEMFAKNAAVDGCKLSISTCRALLSGFAKVGGMEAAEKVMENMIRLKYISDSSSLVELINEGISSNERMEADAAP